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Species belonging to selected taxon:

Barnadesia spinosa



ABOUT THIS RECORD

ID: MNEST000204
species: Barnadesia spinosa
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Barnadesia spinosa Barnadesia Barnadesioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCATCGTCACCATCATCATCA

miRNA*
GTGGTCATGGCTGCCATGTGA

mismatches: 5
bulges: 0

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pre-miRNA
ATTGCCCCCATGGTGGTCATGGCTGCCATGTGATCATCGTCACCATCATCATCATATCCTATT

dot-bracket secondary structure
.........((((((((.((((..((.(((....))).))..)))).))))))))........


SIMILARITIES
miRBase ath-MIR414: 0.0007

PMRD ath-miR414: 0.0007

microPC no hits
UniProt no hits

RFAM mir-598: 0.00005
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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